Mickie Cheng, MD

ASST ADJ PROF-FY

My research interests have been guided by my foundational training in genetics and developmental biology and evolved over the course of my subsequent fellowship training at UCSF to include expertise in basic immunology and immune tolerance. This background has driven my research activities in the areas of autoimmunity and mechanisms of T cell tolerance, specifically applied to reproductive biology and especially to endocrine autoimmunity.

During my career development award, my research centered on the study of autoimmune ovarian disease, utilizing a novel mouse model of spontaneous autoimmune disease, the Aire knockout mouse. These studies focused on identification of a disease-specific ovarian antigen and mechanisms of antigen-specific tolerance induction with the ultimate goal of translating antigenic targets from the animal model to improve diagnostic testing and identify therapeutic targets in human ovarian failure and infertility.

Over time, my research interests have grown to include the application of advanced genomics and next generation sequencing in the characterization of autoimmune endocrine disorders leading to a shift towards more clinical care, clinical research and translationally-oriented research.

My expertise includes:
• Advanced genetics background with experience in human genetics and next generation sequencing analyses
• Basic immunology training with focus on immune tolerance and T cell tolerance as well as experience in autoantigen and autoantibody approaches in human immunology.
• Collaborative, translational research efforts resulting in publication of novel insights into autoimmune endocrinopathies as well as other autoimmune and inflammatory disorders in the lung, pancreas and other systems.

Education
Fellowship, 06/2008 - Endocrinology, Diabetes & Metabolism, University of California San Francisco
MD, PhD, 06/2002 - School of Medicine, University of Texas Southwestern
BA, 06/1994 - Molecular Biology, Princeton University
Publications
  1. Vazquez SE, Ferré EM, Scheel DW, Sunshine S, Miao B, Mandel-Brehm C, Quandt Z, Chan AY, Cheng M, German M, Lionakis M, DeRisi JL, Anderson MS. Identification of novel, clinically correlated autoantigens in the monogenic autoimmune syndrome APS1 by proteome-wide PhIP-Seq. eLife 2020. PMID: 32410729


  2. Moore PC, Cortez JT, Chamberlain CE, Alba D, Berger AC, Quandt Z, Chan A, Cheng MH, Bautista JL, Peng J, German MS, Anderson M, Oakes SA. Elastase 3B mutation links to familial pancreatitis with diabetes and pancreatic adenocarcinoma. The Journal of clinical investigation 2019. PMID: 31369399


  3. Cheng M, Anderson MS. Thymic tolerance as a key brake on autoimmunity. Nature immunology 2018. PMID: 29925986


  4. Bluestone JA, Bour-Jordan H, Cheng M, Anderson M. T cells in the control of organ-specific autoimmunity. Volume 125 of Issue 6. The Journal of clinical investigation 2015. PMID: 25985270


  5. Watkin LB, Jessen B, Wiszniewski W, Vece TJ, Jan M, Sha Y, Thamsen M, Santos-Cortez RL, Lee K, Gambin T, Forbes LR, Law CS, Stray-Pedersen A, Cheng MH, Mace EM, Anderson MS, Liu D, Tang LF, Nicholas SK, Nahmod K, Makedonas G, Canter DL, Kwok PY, Hicks J, Jones KD, Penney S, Jhangiani SN, Rosenblum MD, Dell SD, Waterfield MR, Papa FR, Muzny DM, Zaitlen N, Leal SM, Gonzaga-Jauregui C. COPA mutations impair ER-Golgi transport and cause hereditary autoimmune-mediated lung disease and arthritis. Volume 47 of Issue 6. Nature genetics 2015. PMID: 25894502


  6. Price JV, Haddon DJ, Kemmer D, Delepine G, Mandelbaum G, Jarrell JA, Gupta R, Balboni I, Chakravarty EF, Sokolove J, Shum AK, Anderson MS, Cheng MH, Robinson WH, Browne SK, Holland SM, Baechler EC, Utz PJ. Protein microarray analysis reveals BAFF-binding autoantibodies in systemic lupus erythematosus. Volume 123 of Issue 12. The Journal of clinical investigation 2013. PMID: 24270423


  7. Shum AK, Alimohammadi M, Tan CL, Cheng MH, Metzger TC, Law CS, Lwin W, Perheentupa J, Bour-Jordan H, Carel JC, Husebye ES, De Luca F, Janson C, Sargur R, Dubois N, Kajosaari M, Wolters PJ, Chapman HA, Kämpe O, Anderson MS. BPIFB1 is a lung-specific autoantigen associated with interstitial lung disease. Volume 5 of Issue 206. Science translational medicine 2013. PMID: 24107778


  8. Cheng MH, Anderson MS. Insights into type 1 diabetes from the autoimmune polyendocrine syndromes. Volume 20 of Issue 4. Current opinion in endocrinology, diabetes, and obesity 2013. PMID: 23770732


  9. Mickie H. Cheng. Sleepless and Diabetic. 2012. PMID:


  10. Cheng MH, Anderson MS. Monogenic autoimmunity. Volume 30. Annual review of immunology 2012. PMID: 22224765


  11. Mickie Cheng. Cushing’s Disease Escapes the Knife. 2011. PMID:


  12. Mickie Cheng. ARRESTINg Obesity. 2011. PMID:


  13. Cheng MH, Nelson LM. Mechanisms and models of immune tolerance breakdown in the ovary. Volume 29 of Issue 4. Seminars in reproductive medicine 2011. PMID: 21969265


  14. Mickie H. Cheng. PTPN22: A Risky Business. 2011. PMID:


  15. Mickie H. Cheng. Bioinformatics Is “HIP” in the Islets. 2011. PMID:


  16. Mickie H. Cheng. The Nerve of Those ß Cells. 2011. PMID:


  17. Mickie H. Cheng. DPP4 Joins Weight Watchers. 2011. PMID:


  18. Mickie H. Cheng. Fat Fans the Flames. 2011. PMID:


  19. Mickie H. Cheng. Starve Now, Gain Later. 2011. PMID:


  20. Otsuka N, Tong ZB, Vanevski K, Tu W, Cheng MH, Nelson LM. Autoimmune oophoritis with multiple molecular targets mitigated by transgenic expression of mater. Volume 152 of Issue 6. Endocrinology 2011. PMID: 21447630


  21. Mickie H. Cheng. Bones Break the News on Reproduction. 2011. PMID:


  22. Cheng MH, Fan U, Grewal N, Barnes M, Mehta A, Taylor S, Husebye ES, Murphy EJ, Anderson MS. Acquired autoimmune polyglandular syndrome, thymoma, and an AIRE defect. Volume 362 of Issue 8. The New England journal of medicine 2010. PMID: 20181983


  23. Zhang L, Barker JM, Babu S, Su M, Stenerson M, Cheng M, Shum A, Zamir E, Badolato R, Law A, Eisenbarth GS, Anderson MS. A robust immunoassay for anti-interferon autoantibodies that is highly specific for patients with autoimmune polyglandular syndrome type 1. Volume 125 of Issue 2. Clinical immunology (Orlando, Fla.) 2007. PMID: 17825626


  24. Cheng MH, Shum AK, Anderson MS. What's new in the Aire? Volume 28 of Issue 7. Trends in immunology 2007. PMID: 17556019